FastQCFastQC Report
Sat 31 Jan 2015
s12p.fq

Summary

[OK]Basic Statistics

MeasureValue
Filenames12p.fq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11987826
Sequences flagged as poor quality0
Sequence length36-277
%GC62

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCTTA241550.014.4512270-273
TCTCT464200.09.798517270-273
TTATA309800.09.218905270-273
CTTAT452550.08.882068270-273
TGTCT708750.06.1191034270-273
TATAC429102.1348114E-95.9162936270-273
CTCTT781100.05.416895270-273
Produced by FastQC (version 0.11.2)